Publications

  1. Chelaghma, S., Ke, H., Barylyuk, K., Krueger, T., Kořený, L., & Waller, R.F. (2024) Apical annuli are specialised sites of post-invasion secretion of dense granules in Toxoplasma eLife 13:e94201
  2. Yamada, N., Lewis, W.H., Horiguchi, T., Waller, R.F. (2024) Dinotoms illuminate early pathways toward the stable acquisition of photosynthetic endosymbionts. In Endosymbiotic Organelle Acquisition: Solutions to the Problem of Protein Localization and Membrane Passage (eds Steven Schwartzbach, Miroslav Obornik & Peter Kroth), Springer Nature, (in press)
  3. Moloney, N. Barylyuk, K. Tromer, E.C., Crook, O.M., Breckels, L.M., Lilley, K.S., Waller, R.F. & MacGregor, P. (2023) Mapping diversity in African trypanosomes using high resolution spatial proteomics. Nat. Comms. 14:4401
  4. Kořený, L., Mercado-Saavedra, B.N., Klinger, C.M., Barylyuk, K., Butterworth, S., Hirst, J., Rivera-Cuevas, Y., Zaccai, N.R., Holzer, V.J.C., Klingl, A., Dacks, J.B., Carruthers, V.B., Robinson, M.S., Gras, S. & Waller, R.F. (2023) Stable endocytic structures navigate the complex pellicle of apicomplexan parasites. Nat. Comms. 14: 2167
  5. Guérin, A., Strelau, K*., Barylyuk, K.*, Wallbank, B.A., Berry, L., Crook, O.M., Lilley, K.S., Waller, R.F., & Striepen, B (2023) Cryptosporidium uses multiple distinct secretory organelles to interact with and modify its host cell. Cell Host & Microbe 31(4): 650-664.
  6. Waller, R.F. (2023) Protistology-UK22 autumn meeting report. Eur. J. Protistol. 87: 125954
  7. Hoo, R. Ruiz-Morales, E.R., Kelava, I., Sancho-Serra, C., Mazzeo, C.I.,  Chelaghma, S.,  Tuck, E., Predeus, A.V., Fernandez-Antoran, D., Waller, R.F., Lee, M., & Vento-Tormo, R. (2023). Early infection response of the first trimester human placenta at single-cell scale. bioRxivdoi:doi.org/10.1101/2023.01.02.522155
  8. Waller, R.F., Alves-de-Souza, C., Cleves, P.A, Janouškovec, J., Kayal, E., Krueger, T., Szymczak. J., Yamada, N., & Guillou, L. (2022). Comparative biology and ecology of apicomplexans and dinoflagellates: a unique meeting of minds and biology. Trends Parasitol. 38: 1012-1019
  9. Gornik, S.G., Maegele, I., Hambleton, L., Voss, P.A., Waller, R.F. & Guse, A. (2022) Nuclear transformation of a dinoflagellate symbiont of corals. Front. Mar. Sci. 9:1035413
  10. Lewis, W.H. & Waller, R.F. (2022) Love knows no oxic–anoxic boundaries: anaerobiosis in ciliates provides rich opportunities for microbial symbiosis. Microbiology Today 10: 84-87
  11. Gornik, S.G., Flores, V. Reinhardt, F., Erber, L., Douvropoulou, O., Lassadi, I., Einarsson, E.E., Mörl, M., Git, A., Stadler, P., Pain, A. & Waller, R.F. (2022) Mitochondrial genomes in Perkinsus decode conserved frameshifts in all genes. Mol. Biol. Evol. 39(10): msac191.
  12. Kořený, L., Oborník, M., Horáková, E., Waller, R.F. & Lukeš, J. (2022) The convoluted history of haem biosynthesis. Biological Reviews 97(1): 141-62
  13. Einarsson, E., Lassadi, I., Zielinski, J., Guan, Q., Wyler, T., Pain, A., Gornik, S.G. & Waller, R.F., (2021) Development of the myzozoan aquatic parasite Perkinsus marinus as a versatile experimental genetic model organism. Protist 172(4) 125830.
  14. van Esveld, S. L., Meerstein-Kessel, L., Boshoven, C., Baaij, J. F., Barylyuk, K., Coolen,J. P. M., Duim, R. A. J., Dutilh, B. E., Garza, D. R.,Letterie, M., Proellochs, N. I., de Ridder, M. N., Venkatasubramanian, P. B., de Vries, L. E., Waller, R. F., Kooij, T. W. A. & Huynen, M. A. (2021) A prioritized and validated resource of mitochondrial proteins in Plasmodium identifies leads to unique biology mSphere 6(5) e00614-21
  15. Tromer, E. C., Wemyss, T. A., Ludzia, P., Waller, R.F. & Akiyoshi, B. (2021) Repurposing of synaptonemal complex proteins for kinetochores in Kinetoplastida. Open Biol. 11(5):210049  [preLight]
  16. Kořený, L., Zeeshan, M., Barylyuk, K., Tromer, E. C., van Hooff, J. E., Brady, D., Ke, H.,  Chelaghma, S., Ferguson, D. J. P., Eme, L., Tewari, R., & Waller, R.F. (2021) Molecular characterization of the conoid complex in Toxoplasma reveals its conservation in all apicomplexans, including Plasmodium species.  PLOS Biol 19(3):e3001081  [preLight]
  17. Barylyuk, K., Kořený, L., Ke, H., Butterworth, S., Crook, O.M., Lassadi, I., Gupta, V., Tromer, E.C., Mourier, T., Stevens, T.J., Breckels, L.M., Pain, A., Lilley, K.S., & Waller, R.F. (2020) A comprehensive subcellular atlas of the Toxoplasma proteome via hyperLOPIT provides spatial context for protein functions. Cell Host & Microbe 28(5): 752-766   [preLight]
  18. Beedessee, G., Kubota, T, Arimoto, A, Nishitsuji, K., Waller, R.F., Hisata, K., Yamasaki, S., Satoh, N., Kobayashi, J., & Shoguchi, E (2020) Integrated omics unveil the secondary metabolic landscape of a basal dinoflagellate. BMC Biology 18: 139
  19. Katris, N.J. Yamaryo-Botte, Y., Janouškovec, J., Shunmugam, S., Arnold, C-S., Yang, A.S.P., Vardakis, A., Steward, R.J., Sauerwein, R., McFadden, G.I., Tonkin, C.J. Cesbron-Delauw, M-F., Waller, R.F. & Botte, C.Y. (2020) Rapid kinetics of lipid second messengers controlled by a cGMP signalling network coordinates apical complex functions in Toxoplasma tachyzoites. bioRixv https://doi.org/10.1101/2020.06.19.160341
  20. Dos Santos Pacheco, N., Tosetti, N., Kořený, L., Waller, R.F. & Soldati-Favre, D. (2020) Evolution, composition, assembly and function of the conoid in Apicomplexa. Trends Parasitol. 36(8): 688-704  [Open Access Version]
  21. Faktorová, D., Nisbet, R.E.R., Fernández Robledo, J.A., Casacuberta, Sudek, L., et al (2020) Genetic tool development in marine protists: Emerging model organisms for experimental cell biology. Nat. Methods 17(5):481-494
  22. Zeeshan, M., Pandey, R., Ferguson, D.J.P., Tromer, E.C., Markus, R., Abel, S., Brady, D., Daniel, E., Limenitakis, R., Bottrill, A.R., LeRoch, K.G., Holder, A.A., Waller, R.F., Guttery, D.S., & Tewari, R. (2020) Real-time dynamics of Plasmodium NDC80 reveals unusual modes of chromosome segregation during parasite proliferation. J Cell Sci. 10: e13082
  23. Gornik, S.G., Hu, I., Lassadi, I. & Waller, R.F. (2019) The biochemistry and evolution of the dinoflagellate nucleus. Microorganisms 7(8): e245
  24. Hicks, J.L., Lassadi, I., Carpenter, E., Eno, M., Vardakis, A., Waller, R.F., Howe, & C.J. Nisbet, R.E.R. (2019). An essential pentatricopeptide repeat protein in the apicomplexan remnant chloroplast. Cell Microbiol. Aug 27: e13108
  25. Nimmo, I.C., Barbrook, A.C., Lassadi, I., Chen, J.E., Geisler, K., Smith, A.G., Aranda, M., Purton, S., Waller, R.F., Nisbet, R.E.R., &Howe, C.J. (2019) Genetic transformation of the dinoflagellate chloroplast. Elife 8:e45292
  26. Wall, R.J., Zeeshan, M., Katris, N.J., Limenitakis, E.R., Stock, J., Brady, D. Waller, R.F., Holder, A.A. and Tewari, R. (2019) Systematic analysis of Plasmodium myosins reveals differential expression, localization and function in invasive and proliferative parasite stages Cell Microbiol. Jul 8:e13082
  27. Katris, N.J., Ke, H., McFadden, G.I., van Dooren, G.G. & Waller, R.F. (2019) Calcium negatively regulates secretion from dense granules in Toxoplasma gondii. Cell Microbiol. 21 (6):e13011
  28. Wetherbee R, Marcelino, V.R., Costa, J.F, Grant, B., Crawford, S., Waller, R.F., Andersen, R.R.A., Berry, D., McFadden, G.I. & Verbruggen, H. (2019). A new marine prasinophyte genus alternates between a flagellate and a dominant benthic stage with microrhizoids for adhesion. J. Phycol. 55(6): 1210-25
  29. Waller, R.F., Cleves, P.A., Rubio-Brotons, M., Woods, A., Bender, S.J., Edgcomb, V., Gann, E.R., Jones, A.J., Teytelman, L., von Dassow, P., Wilhelm, S.W. & Collier, J.L. (2018) Strength in numbers: collaborative science for new experimental model systems. PLOS Biology 16(7):e2006333
  30. Uboldi, A.D., Wilde, M.L., McRae, E.A., Stewart, R.J., Dagley, L.F., Yang, L., Katris, N.J., Hapuarachchi, S.V., Coffey, M.J., Lehane, A.M., Botte, C.Y., Waller, R.F., Webb, A.I. & Tonkin, C.J. (2018) Protein kinase A negatively regulates Ca2+ signaling in Toxoplasma gondii. PLOS Biology 16(9):e2005642
  31. Biddau, M., Bouchut, A., Major, J., Saveria, T., Tottey, J., Oka, O., van-Lith, M., Jennings, K.E., Ovciarikova, J., DeRocher, A., Striepen, B., Waller, R.F., Parsons, M. & Sheiner, L. (2018) Two essential Thioredoxins mediate apicoplast biogenesis, protein import, and gene expression in Toxoplasma gondii. PLOS Pathog. 14(2): e1006836
  32. Waller, R.F. & Kořený, L. (2017) Plastid Complexity in Dinoflagellates: A Picture of Gains, Losses, Replacements and Revisions. In Secondary Endosymbioses (ed Yoshihisa Hirakawa), Vol 84, Advances in Botanical Research, UK: Academic Press, 2017, pp. 105-144   [Open Access version]
  33. Saini, E., Zeeshan, M., Brady, D., Pandey, R., Kaiser, G., Kořený, L., Sheokand, P., Thakur, V., Tatiya, S., N.J., Limenitakis, R., Kaur, I., Green, J.L., Bottrill, A.R., Guttery, D.S., Waller, R.F., Heussler V., Holder, A.A., Mohmmed, A.A., Malhotra, P. & Tewari, R. (2017) Photosensitized INA-Labelled protein 1 (PhIL1) is a novel component of the inner membrane complex and is required for Plasmodium parasite development. Sci. Rep. 7:15577
  34. Janouškovec, J., Gavelis, G.S., Burki, F., Dinh, D., Bachvaroff, T.R., Gornik, G.S., Bright, K.J., Imanian, B., Strom, S.L., Delwiche, C.F., Waller, R.F, Fensome, R.A., Leander, B.S., Rohwer, F.L., & Saldarriaga J.F. (2017) Major transitions in dinoflagellate evolution unveiled by phylotranscriptomics. PNAS 114(2):e171-180
  35. Wall, R.J, Roques, M., Katris, N.J., Kořený, L., Stanway, R.R., Brady, D., Waller, R.F. & Tewari, R. (2016) SAS6-like protein in Plasmodium indicates that conoid-associated apical complex proteins persist in invasive stages within the mosquito vector. Sci. Rep. 6:28604
  36. Waller, R.F., Gornik, S.G., Kořený, L. & Pain, A (2016) Metabolic pathway redundancy within the apicomplexan-dinoflagellate radiation argues against an ancient chromalveolate plastid. Comm. Integrat. Biol. 9: e1116653
  37. Jacot, D., Waller, R.F., Soldati-Favre, D., MacPherson, D.A., & MacRae, J.I. (2016) Apicomplexan energy metabolism: carbon source promiscuity and the quiescence hyperbole. Trends Parasitol. 32 (1), 56-70 TIP
  38. Woo, Y.H., Ansari, H., et al. (2015) Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites. eLife 4: e06974
  39. Gornik, S.G., Febrimarsa, Cassin, A., MacRae, J.I., Ramaprasad, A., Rchiad, Z., McConville, M.J., Bacic, A., McFadden, G.I., Pain, A. & Waller, R.F. (2015) Endosymbiosis undone by stepwise elimination of the plastid in a parasitic dinoflagellate. PNAS 112: 5767-72
  40. Wetherbee, R., Gornik, S.G., Grant, B. & Waller, R.F. (2015) Andersenia, a genus of filamentous, sand-dwelling Pelagophyceae from southeastern Australia. Phycologia 54: 35-48
  41. Katris, N.J., van Dooren, G.G., McMillan, P.J., Hanssen, E., Tilley, L. & Waller, R.F. (2014) The apical complex provides a regulated gateway for secretion of invasion factors in Toxoplasma. PLOS Pathog. 10: e1004074
  42. Hewitt, V, Lithgow, T & Waller, R.F. (2014) Modifications and innovations in the evolution of mitochondrial protein import pathways.In Endosymbiosis (ed Wolfgang Loffelhardt) Springer, New York, USA pp 19-25
  43. Bachvaroff, T.R., Gornik, S.G., Concepcion, G.T., Waller, R.F., Mednez, G.S., Lippmeier, J.C. & Delwiche, C.F. (2014) Dinoflagellate phylogeny revisited: using ribosomal proteins to resolve deep branching dinoflagellate clades. Mol. Phylogen. Evol. 70: 314-22
  44. Teng, C.Y., Dang, Y., Danne, J.C., Waller, R.F. & Green, B.R. (2013) Mitochondrial genes of dinoflagellates are transcribed by a nuclear-encoded single-subunit RNA polymerase. PLOS ONE  8(6): e65387
  45. El-Haddad, H., Pryzborski , J.M., Kraft, L.J.K., McFadden, G.I., Waller, R.F., & Gould, S.B. (2013) Characterization of TtALV2, an essential charged repeat motif protein of the Tetrahymena thermophila membrane skeleton. Euk. Cell 12(6): 932-40EukCell_2013_Cover
  46. Jackson, C.J. & Waller, R.F. (2013) A widespread and unusual RNA trans-splicing type in dinoflagellate mitochondria. PLoS ONE 8(2): e56777
  47. Danne, J.C., Gornik, S.G., MacRae, J.I., McConville, M.J. & Waller, R.F. (2013) Alveolate mitochondrial metabolic evolution: dinoflagellates force reassessment of the role of parasitism as a driver of change in apicomplexans. Mol. Biol. Evol. 30(1): 123-39
  48. Gornik, S.G., Cranenburgh, A. & Waller, R.F. (2013) New host range for Hematodinium in Southern Australia and novel tools for sensitive detection of parasitic dinoflagellates. PLOS ONE 8(12): e82774
  49. Jackson, C.J., Gornik, S.G. & Waller, R.F. (2013) A tertiary plastid gains RNA editing in its new host. Mol. Biol. Evol. 30(4):788-92
  50. Grant, B., Waller, R.F., Clementson, L.A. & Wetherbee, R. (2013) Psammomonas australis gen. et sp. nov. (Raphidophyceae), a new dimorphic, sand-dwelling raphidophyte. Phycologia  52(1):57-64
  51. Gornik, S.G., Ford, K.L., Mulhern, T.D., Bacic, A., McFadden, G.I. & Waller, R.F. (2012) Loss of nucleosomal DNA condensation coincides with appearance of a novel nuclear protein in dinoflagellates. Curr. Biol. 22(24): 2303-12     [Commentary] Current_Biology_2012_CoverImage
  52. Waller, R.F. (2012) Second genesis of a plastid organelle. PNAS 109(14): 5142-3
  53. Jackson, C.J., Gornik, S.G. and Waller, R.F. (2012) The mitochondrial genome and transcriptome of the basal dinoflagellate Hematodinium sp.: character evolution within the highly derived mitochondrial genomes of dinoflagellates. Genome Biol. Evol. 4(1):59-72
  54. Danne, J.C., Gornik, S.G. & Waller, R.F. (2012) An assessment of vertical inheritance versus endosymbiont transfer of nucleus- encoded genes for mitochondrial proteins following tertiary endosymbiosis in Karlodinium micrum. Protist 16(1):76-90 
  55. Burger, G., Jackson, C.J. & Waller, R.F. (2012) Unusual mitochondrial genomes and genes. In Organelle Genetics (ed Charles Bullerwell) Springer, New York, USA. pp 41-77
  56. Danne, J.C. & Waller, R.F. (2011) Analysis of dinoflagellate mitochondrial protein sorting signals indicates a highly stable protein targeting system across eukaryotic diversity. J. Mol. Biol. 408: 643-53
  57. Gould. S.B., Kraft, L.G.K, van Dooren, G.G., Goodman, C.D., Ford, K.L., Cassin, A.M., Bacic, A. McFadden, G.I. & Waller, R.F. (2011) Ciliate pellicular proteome identifies novel protein families with characteristic repeat motIfs that are common to Alveolates. Mol. Biol. Evol. 28: 1319-31
  58. Grant, B., Waller, R.F. & Wetherbee, R. (2011) Platychrysis moestrupii sp.nov. (Prymnesiophyceae): a new dimorphic, sand-dwelling haptophyte species from southeastern Australia. Phycologia 50(6): 608-15
  59. Kraft, L.G.K, Kraft, G.T. & Waller, R.F. (2010) Investigations into southern Australian Ulva (Ulvophyceae, Chlorophyta) taxonomy and molecular phylogeny indicate both cosmopolitanism and endemic cryptic species. J. Phycol. 46(6): 1257-77
  60. Waller, R.F. (2010) Origin of Life. In Biology: An Australian Focus. (eds Knox, Ladiges, Saint, Evans) McGraw-Hill, North Ryde, Aulstralia. pp 3-5
  61. Waller, R.F. & Jackson, C.J. (2009) Dinoflagellate mitochondrial genomes: stretching the rules of molecular biology. BioEssays 31(2):237-45     [Highlight]BioEssays_2009_Cover
  62. Waller, R.F., Jabbour, C., Chan, N.C., Celik, N., Likić, V.A., Mulhern, T.D. & Lithgow, T. (2009) Evidence of a reduced and modified mitochondrial protein import apparatus in microsporidian mitosomes. Euk. Cell 8: 19-26
  63. Osborne, S.E., Walthers, D., Tomljenovic, A.M., Mulder, D.T., Silphaduang, U., Duong, N., Lowden, M.J., Wickham, M.E., Waller, R.F., Kenney, L.J. and Coombes, B.K (2009) Pathogenic adaptation of intracellular bacteria by rewiring a cis-regulatory input function. PNAS 106(10):3982-7
  64. Pusnik, M., Charriere, F., Maser, P., Waller, R.F., Dagley, M., Lithgow, T. and Schneider, A. (2009) The single mitochondrial porin of Trypanosoma brucei is the main metabolite transporter in the outer mitochondrial membrane. Mol. Biol. Evol. 26: 671-80
  65. Gould, S.B., Tham, W-H., Cowman, A.F., McFadden, G.I. and Waller, R.F. (2008) Alveolins, a New Family of Cortical Proteins that Define the Protist Infrakingdom Alveolata.  Mol. Biol. Evol. 25:1219-30
  66. Gould, S.B., Waller, R.F. and McFadden, G.I. (2008) Plastid Evolution. Ann. Rev. Plant Biol. 59:491-517
  67. Perry, A.J., Rimmer, K.A., Mertens, J.D., Waller, R.F., Mulhern, T.D., Lithgow, T. and Gooley, P.R. (2008) Structure, topology and function of the translocase of the outer membrane of mitochondria. Plant Physiol. Biochem. 46:265-74
  68. Carpenter, K.J., Waller, R.F. and Keeling, P.J. (2008) Surface morphology of Saccinobaculus (Oxymonadida): implications for character evolution and function in oxymonads. Protist 159: 209-21
  69. Patron, N.J. and Waller, R.F. (2007) Transit peptide diversity and divergence: a global analysis of plastid targeting signals. BioEssays 29:1048-58
  70. Jackson, C.J., Norman, J.E., Schnare, M.N., Gray, M.W., Keeling, P.J. and Waller, R.F. (2007) Broad genomic and transcriptional analysis reveals a highly derived genome in dinoflagellate mitochondria. BMC Biology 5:4
  71. Patron, N.J., Waller, R.F., Conzijnsen, A.J., Straney, D.C., Gardiner, D.M., Nierman, W.C. and Howlett, B.J. (2007) Origin and distribution of epipolythiodioxopiperazine (ETP) gene clusters in filamentous ascomycetes. BMC Evol. Biol. 7:174
  72. Waller, R.F. and Keeling, P.J. (2006) Alveolate and chlorophycean mitochondrial cox2 genes split twice independently. Gene 383: 33-37
  73. Morita, Y.S., Sena, C.B.C., Waller, R.F., Kurokawa, K., Sernee, M.F., Nakatani, F., Haites, R.E., Billman-Jacobe, H., McConville, M.J., and Maeda, Y. (2006) PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of phosphatidyl-inositol mannoside in mycobacteria. J. Biol. Chem. 281:25143-55
  74. Eisen, J.A., et al. (2006) Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote. PLOS Biology 4:e286
  75. Waller, R.F., Slamovitz, C.H. and Keeling, P.J. (2006) Lateral gene transfer of a multi-gene region from cyanobacteria to dinoflagellates resulting in a novel plastid-targeted fusion protein. Mol. Biol. Evol. 23:1437-43
  76. Waller, R.F., Patron, N.J. and Keeling, P.J. (2006) Phylogenetic history of plastid-targeted proteins in peridinin-containing dinoflagellate Heterocapsa triquestra. Int. J. Sys. Evol. Microbiol. 56: 1439-1447
  77. Patron, N.J., Waller, R.F. and Keeling, P.J. (2006) A tertiary plastid uses genes from two endosymbionts. J. Mol. Biol. 357:1373-82
  78. Chan, N.C., Likić, V.A., Waller, R.F., Mulhern, T.D. and Lithgow, T. (2006) The C-terminal TPR domain of Tom70 defines a family of mitochondrial protein import receptors found only in animals and fungi. J. Mol. Biol. 358:1010-22
  79. Patron, N.J., Waller, R.F., Archibald, J.M. and Keeling, P.J. (2005) Complex protein targeting to dinoflagellate plastids. J. Mol. Biol. 348:1015-24
  80. Waller, R.F. and McFadden, G.I. (2005) The apicoplast: a review of the derived plastid of apicomplexan parasites. Curr. Issues Mol. Biol. 7: 57-79Current_issues_in_molecular_biology_2005_Cover
  81. Morita, Y.S., Velasquez, R., Taig, E., Waller, R.F., Patterson, J.H., Tull, D.T., Williams, S.J., Billman-Jacobe, H., McConville, M.J. (2005) Compartmentalization of lipid biosynthesis in mycobacteria.  J. Biol. Chem. 280: 21645-52
  82. Likić, V.A., Peryy, A., Hulett, J., Traven, A., Curran, S., Waller, R.F., Keeling, P.J., Gooley, P.R. and Lithgow, T. (2005) Patterns that define the four domains conserved in known and novel isoforms of the protein import receptor Tom20. J. Mol. Biol. 347: 81-93
  83. Waller, R.F. and McFadden G.I. (2004) The Apicoplast. In Genomes and the Molecular Cell Biology of Malaria Parasites. (Waters A and Janse C eds) Horizon Scientific Press.
  84. Dodge M.A., Waller, R.F., Chow, L.M.C., Zaman, M.M., Cotton, L.M. McConville, M.J., and Wirth, D.F. (2004) Localization and activity of multi-drug resistance protein 1 in the secretory pathway of Leishmania parasites. Mol. Micro. 51: 1563-75
  85. Waller, R.F., McConville, M.J., and McFadden, G.I. (2004) More plastids in human parasites? Trends Parasitol. 20:54-7
  86. Ralph, S.R., van Dooren, G.G., Waller, R.F., Crawford, M.J., Fraunholz, M., Foth, B.J., Roos, D.S., and McFadden, G.I. (2004) Tropical infectious diseases: metabolic maps and functions of the Plasmodium falciparum apicoplast. Nature Rev. Micro. 2: 203-16
  87. Gentle, I., Gabriel, K., Beech, P., Waller, R.F., and Lithgow, T. (2004) The Omp85 family of proteins is essential for outer membrane biogenesis in mitochondria and bacteria. J. Cell Biol. 164:19-24
  88. Bandyopadhyay, S., Chatterjee, M., Pal, S., Waller, R.F., Sundar, S., McConville, M.J., Mandal, C. (2004) Purification, characterization of O-acetylated sialoglycoconjugates-specific IgM, and development of an enzyme-linked immunosorbent assay for diagnosis and follow-up of Indian visceral leishmaniasis patients. Diagnostic Micro. Infect. Dis. 50: 15-24
  89. Waller, R.F., Keeling, P.J., van Dooren, G., and McFadden, G.I. (2003) Comment on a green algal apicoplast ancestor.  Science 301: 49a-50a
  90. Waller, R.F., Ralph, S.A., Reed, M.B., Su, V., Douglas, J.D., Minnikin, D.E., Cowman, A.F., Besra, G.S., and McFadden, G.I. (2003) A type II pathway for fatty acid biosynthesis presents drug targets in Plasmodium falciparum. Antimicrob. Agents Chemoth. 47: 297-301
  91. Patterson, J.H., Waller, R.F., Jeevarajah, D., Billman-Jacobe, H. and McConville, M.J (2003) Mannose metabolism is required for mycobacterial growth. Biochem. J. 15: 77-86
  92. Waller, R.F. and McConville, M.J. (2002) Developmental changes in lysosome morphology and function in Leishmania parasites. Int. J. Parasitol. 32: 1435-45
  93. Waller, R.F., Reed, M.B., Cowman, A.F. and McFadden, G.I. (2000) Protein trafficking to the plastid of Plasmodium falciparum is via the secretory pathway. EMBO J. 19: 1794-1802
  94. Van Dooren, G.G., Waller, R.F., Joiner, K.A., Roos, D.S. and McFadden, G.I (2000) Protein transport in Plasmodium falciparum: Traffic jams. Parasitol. Today 16:421-7
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